A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
/gpfs/projects/bgmp/malm/bioinfo/VC-GATK/aligned_reads
General Statistics
| Sample Name | Insert Size | Mean Insert Size |
|---|---|---|
| SRR062634_sorted_dedup_bqsr_reads | 183bp | 179bp |
Picard
Tools for manipulating high-throughput sequencing data.URL: http://broadinstitute.github.io/picard
Alignment Summary
Please note that Picard's read counts are divided by two for paired-end data. Total bases (including unaligned) is not provided.
Mean read length
The mean read length of the set of reads examined.
Insert Size
Plot shows the number of reads at a given insert size. Reads with different orientations are summed.